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sd-ner-v2

Token Classification
Transformers
PyTorch
TensorBoard
bert
Generated from Trainer
Model card Files
xet
Metrics Community
2
Dr. Jorge Abreu Vicente commited on
Commit
8315fe7
·
1 Parent(s): 6b37dd5

End of training

Browse files
Files changed (20) hide show
  1. config.json +12 -9
  2. pytorch_model.bin +2 -2
  3. runs/Jan18_12-55-19_74c6fcc0d76a/1674046688.671172/events.out.tfevents.1674046688.74c6fcc0d76a.20451.1 +3 -0
  4. runs/Jan18_12-55-19_74c6fcc0d76a/events.out.tfevents.1674046688.74c6fcc0d76a.20451.0 +3 -0
  5. runs/Jan18_12-55-19_74c6fcc0d76a/losses_main_loss_eval/events.out.tfevents.1674047253.74c6fcc0d76a.20451.5 +3 -0
  6. runs/Jan18_12-55-19_74c6fcc0d76a/losses_main_loss_train/events.out.tfevents.1674046699.74c6fcc0d76a.20451.2 +3 -0
  7. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_epoch_epoch/events.out.tfevents.1674046699.74c6fcc0d76a.20451.4 +3 -0
  8. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_accuracy_score_eval_accuracy_score/events.out.tfevents.1674047253.74c6fcc0d76a.20451.6 +3 -0
  9. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_f1_eval_f1/events.out.tfevents.1674047253.74c6fcc0d76a.20451.9 +3 -0
  10. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_precision_eval_precision/events.out.tfevents.1674047253.74c6fcc0d76a.20451.7 +3 -0
  11. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_recall_eval_recall/events.out.tfevents.1674047253.74c6fcc0d76a.20451.8 +3 -0
  12. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_runtime_eval_runtime/events.out.tfevents.1674047253.74c6fcc0d76a.20451.10 +3 -0
  13. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_samples_per_second_eval_samples_per_second/events.out.tfevents.1674047253.74c6fcc0d76a.20451.11 +3 -0
  14. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_eval_steps_per_second_eval_steps_per_second/events.out.tfevents.1674047253.74c6fcc0d76a.20451.12 +3 -0
  15. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_learning_rate_learning_rate/events.out.tfevents.1674046699.74c6fcc0d76a.20451.3 +3 -0
  16. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_train_loss_train_loss/events.out.tfevents.1674047813.74c6fcc0d76a.20451.16 +3 -0
  17. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_train_runtime_train_runtime/events.out.tfevents.1674047813.74c6fcc0d76a.20451.13 +3 -0
  18. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_train_samples_per_second_train_samples_per_second/events.out.tfevents.1674047813.74c6fcc0d76a.20451.14 +3 -0
  19. runs/Jan18_12-55-19_74c6fcc0d76a/other_data_train_steps_per_second_train_steps_per_second/events.out.tfevents.1674047813.74c6fcc0d76a.20451.15 +3 -0
  20. training_args.bin +2 -2
config.json CHANGED
@@ -1,14 +1,13 @@
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  {
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- "_name_or_path": "michiyasunaga/BioLinkBERT-large",
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  "attention_probs_dropout_prob": 0.1,
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  "hidden_act": "gelu",
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- "hidden_size": 1024,
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  "id2label": {
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  "0": "O",
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  "1": "B-SMALL_MOLECULE",
@@ -24,12 +23,15 @@
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  "11": "B-ORGANISM",
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  "12": "I-ORGANISM",
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  "13": "B-EXP_ASSAY",
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- "14": "I-EXP_ASSAY"
 
 
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  },
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- "intermediate_size": 4096,
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  "label2id": {
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  "B-CELL": 7,
 
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  "B-ORGANISM": 11,
@@ -37,6 +39,7 @@
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  "B-SUBCELLULAR": 5,
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  "I-CELL": 8,
 
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  "I-GENEPROD": 4,
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  "I-ORGANISM": 12,
@@ -49,13 +52,13 @@
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  "position_embedding_type": "absolute",
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  "type_vocab_size": 2,
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  "use_cache": true,
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- "vocab_size": 28895
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  "architectures": [
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  "classifier_dropout": null,
 
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  "11": "B-ORGANISM",
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  "12": "I-ORGANISM",
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  "13": "B-EXP_ASSAY",
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+ "14": "I-EXP_ASSAY",
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+ "16": "I-DISEASE"
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+ "intermediate_size": 3072,
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  "B-EXP_ASSAY": 13,
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  "B-GENEPROD": 3,
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  "B-ORGANISM": 11,
 
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  "B-SUBCELLULAR": 5,
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  "B-TISSUE": 9,
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  "I-CELL": 8,
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+ "I-DISEASE": 16,
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  "I-EXP_ASSAY": 14,
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  "I-GENEPROD": 4,
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  "I-ORGANISM": 12,
 
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  "max_length": 512,
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  "max_position_embeddings": 512,
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  "model_type": "bert",
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+ "num_attention_heads": 12,
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+ "num_hidden_layers": 12,
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  "pad_token_id": 0,
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  "position_embedding_type": "absolute",
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  "torch_dtype": "float32",
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+ "transformers_version": "4.20.0",
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  "type_vocab_size": 2,
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  "use_cache": true,
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+ "vocab_size": 30522
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