| (MaximumNumberOfIterations 350 250 200 150 100) | |
| (NumberOfSpatialSamples 3000) | |
| (Transform "RecursiveBSplineTransform") | |
| (NumberOfResolutions 5) | |
| (FinalGridSpacingInPhysicalUnits 10) | |
| (FixedImagePyramid "FixedGenericImagePyramid") | |
| (MovingImagePyramid "MovingGenericImagePyramid") | |
| (FixedImagePyramidRescaleSchedule 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1) | |
| (MovingImagePyramidRescaleSchedule 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1) | |
| // (GridSpacingSchedule 10.000000 5.000000 2.000000 1.000000) | |
| (ImpactModelsPath0 "/Data/Model/TS/MRSegmentator_8_Layers.pt") | |
| (ImpactDimension0 3) | |
| (ImpactNumberOfChannels0 1) | |
| (ImpactPatchSize0 0 0 0) | |
| (ImpactVoxelSize0 3 3 3) | |
| (ImpactLayersMask0 "01000001") | |
| (ImpactSubsetFeatures0 64 64) | |
| (ImpactPCA0 0 0) | |
| (ImpactDistance0 "L1" "Dice") | |
| (ImpactLayersWeight0 0.1 0.9) | |
| (ImpactModelsPath1 "/Data/Model/TS/MRSegmentator_8_Layers.pt") | |
| (ImpactDimension1 3) | |
| (ImpactNumberOfChannels1 1) | |
| (ImpactPatchSize1 0 0 0) | |
| (ImpactVoxelSize1 3 3 3) | |
| (ImpactLayersMask1 "01000001") | |
| (ImpactSubsetFeatures1 64 64) | |
| (ImpactPCA1 0 0) | |
| (ImpactDistance1 "L1" "Dice") | |
| (ImpactLayersWeight1 0.2 0.8) | |
| (ImpactModelsPath2 "/Data/Model/TS/MRSegmentator_8_Layers.pt") | |
| (ImpactDimension2 3) | |
| (ImpactNumberOfChannels2 1) | |
| (ImpactPatchSize2 0 0 0) | |
| (ImpactVoxelSize2 2 2 3) | |
| (ImpactLayersMask2 "01000001") | |
| (ImpactSubsetFeatures2 64 64) | |
| (ImpactPCA2 0 0) | |
| (ImpactDistance2 "L1" "Dice") | |
| (ImpactLayersWeight2 0.3 0.7) | |
| (ImpactModelsPath3 "/Data/Model/TS/MRSegmentator_8_Layers.pt") | |
| (ImpactDimension3 3) | |
| (ImpactNumberOfChannels3 1) | |
| (ImpactPatchSize3 0 0 0) | |
| (ImpactVoxelSize3 2 2 3) | |
| (ImpactLayersMask3 "01000001") | |
| (ImpactSubsetFeatures3 64 64) | |
| (ImpactPCA3 0 0) | |
| (ImpactDistance3 "L1" "Dice") | |
| (ImpactLayersWeight3 0.5 0.5) | |
| (ImpactModelsPath4 "/Data/Model/TS/MRSegmentator_8_Layers.pt") | |
| (ImpactDimension4 3) | |
| (ImpactNumberOfChannels4 1) | |
| (ImpactPatchSize4 0 0 0) | |
| (ImpactVoxelSize4 2 2 3) | |
| (ImpactLayersMask4 "01000001") | |
| (ImpactSubsetFeatures4 64 64) | |
| (ImpactPCA4 0 0) | |
| (ImpactDistance4 "L1" "Dice") | |
| (ImpactLayersWeight4 0.7 0.3) | |
| (ImpactUseMixedPrecision "true") | |
| (ImpactFeaturesMapUpdateInterval -1) | |
| (ImpactWriteFeatureMaps "false") | |
| (ImpactMode "Static") | |
| (ImpactGPU 0) | |
| (Metric "Impact" "AdvancedMattesMutualInformation" "TransformBendingEnergyPenalty") | |
| (Metric0Weight 1) | |
| (Metric1Weight 0.3) | |
| (Metric2Weight 10) | |
| // imageTypes | |
| (FixedInternalImagePixelType "float") | |
| (MovingInternalImagePixelType "float") | |
| (UseDirectionCosines "true") | |
| // components | |
| (Registration "MultiMetricMultiResolutionRegistration") | |
| (BSplineTransformSplineOrder 3) | |
| (UseCyclicTransform "false") | |
| // transform | |
| (AutomaticTransformInitialization "false") | |
| (AutomaticTransformInitializationMethod "GeometricalCenter") | |
| (AutomaticScalesEstimation "true") | |
| (HowToCombineTransforms "Compose") | |
| // optimizer | |
| (Optimizer "AdaptiveStochasticGradientDescent") | |
| (MaximumNumberOfSamplingAttempts 8) | |
| (UseAdaptiveStepSizes "true") | |
| (UseMultiThreadingForMetrics "true") | |
| (ASGDParameterEstimationMethod "DisplacementDistribution") | |
| //(MaximumStepLength 0.6602) | |
| (SigmoidInitialTime 0.0) | |
| (NoiseCompensation "true") | |
| (NumberOfSamplesForExactGradient 4096) | |
| // automatic | |
| (AutomaticParameterEstimation "true") | |
| //(SP_alpha 1) | |
| //(SP_A 20.0) | |
| //(SP a 400) | |
| //(SigmoidMax 1.0) | |
| //(SigmoidMin -0.8) | |
| //(SigmoidScale 0.00000001) | |
| //(NumberOfGradientMeasurements 10) | |
| //(NumberOfJacobianMeasurements 1000) | |
| (FixedKernelBSplineOrder 3) | |
| (MovingKernelBSplineOrder 3) | |
| (CheckNumberOfSamples "true") | |
| (UseRelativeWeights "false") | |
| // several | |
| (WriteTransformParametersEachIteration "false") | |
| (WriteTransformParametersEachResolution "false") | |
| (ShowExactMetricValue "false") | |
| (ErodeFixedMask "false") | |
| (ErodeMovingMask "false") | |
| (UseBinaryFormatForTransformationParameters "false") | |
| // imageSampler | |
| (Interpolator "BSplineInterpolator") | |
| (ImageSampler "RandomCoordinate") | |
| (NewSamplesEveryIteration "true") | |
| (UseRandomSampleRegion "false") | |
| // interpolator and resampler | |
| (ResampleInterpolator "FinalBSplineInterpolator") | |
| (FinalBSplineInterpolationOrder 3) | |
| (BSplineInterpolationOrder 3) | |
| (Resampler "DefaultResampler") | |
| (WriteIterationInfo "false") | |
| (WriteResultImage "false") | |
| (DefaultPixelValue 0) | |
| (ResultImageFormat "nii.gz") |