Datasets:
Reorder metadata file columns for individuals so image is prominent
Browse files
README.md
CHANGED
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@@ -178,14 +178,14 @@ Segmentation was completed by adapting the elytra length and width annotations t
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**individual_specimen/metadata.csv**: This CSV was created for individually cropped images.
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- `groupImageFilePath`: Relative path to group image from the _root of the repository_ (`group_images/<pictureID>.jpg`)
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- `NEON_sampleID`: NEON identifier for the sample (576 unique IDs), prefixed by the `plotID`. (Matches `NEON_sampleID` in `BeetleMeasurements.csv`.)
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- `scientificName`: Binomial scientific name of the specimen.
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- `siteID`: String. Identifier for the site from which the specimens were collected. There 30 different site IDs. For more information on the sites, visit: https://www.neonscience.org/field-sites/explore-field-sites.
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- `site_name`: Name of field site from which the specimens were collected. There are 43 different field site names. -- These lack consistency (sometimes "NEON" or "Site" was used in the name causing duplicates), and will be updated using the site codes.
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- `plotID`: Identifier for the plot from which the specimens were collected (`<siteID>_<plot number>`). Each site has multiple plots; there are 144 total plots from which specimens were collected.
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**Separate_segmented_train_test_splits_80_20/metadata.csv**: metadata file for the segmented individuals in the `Separate_segmented_train_test_splits_80_20` folder.
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- `filename`: name of image file (`beetle_<number code>.png`).
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**individual_specimen/metadata.csv**: This CSV was created for individually cropped images.
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- `file_name`: Relative path _from metadata file location_ to images for dataset viewer functionality (`part_<part_number>/<pictureID>_specimen_<number>.png`); displays the image in the viewer.
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- `NEON_sampleID`: NEON identifier for the sample (576 unique IDs), prefixed by the `plotID`. (Matches `NEON_sampleID` in `BeetleMeasurements.csv`.)
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- `scientificName`: Binomial scientific name of the specimen.
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- `siteID`: String. Identifier for the site from which the specimens were collected. There 30 different site IDs. For more information on the sites, visit: https://www.neonscience.org/field-sites/explore-field-sites.
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- `site_name`: Name of field site from which the specimens were collected. There are 43 different field site names. -- These lack consistency (sometimes "NEON" or "Site" was used in the name causing duplicates), and will be updated using the site codes.
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- `plotID`: Identifier for the plot from which the specimens were collected (`<siteID>_<plot number>`). Each site has multiple plots; there are 144 total plots from which specimens were collected.
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- `individualImageFilePath`: Relative path to individual image from the _root of the repository_ (`individual_specimens/part_<part_number>/<pictureID>_specimen_<number>.png`). The `number` corresponds to the position of the beetle specimen within the group image, numbered from left to right and top to bottom.
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- `groupImageFilePath`: Relative path to group image from the _root of the repository_ (`group_images/<pictureID>.jpg`)
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**Separate_segmented_train_test_splits_80_20/metadata.csv**: metadata file for the segmented individuals in the `Separate_segmented_train_test_splits_80_20` folder.
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- `filename`: name of image file (`beetle_<number code>.png`).
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