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upvoted an article 3 months ago

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Welcome GPT OSS, the new open-source model family from OpenAI!

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Aug 5

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upvoted 19 papers 4 months ago

Bootstrapped Training of Score-Conditioned Generator for Offline Design of Biological Sequences

Paper • 2306.03111 • Published Jun 5, 2023 • 1

xTrimoPGLM: Unified 100B-Scale Pre-trained Transformer for Deciphering the Language of Protein

Paper • 2401.06199 • Published Jan 11, 2024 • 3

Large-Scale Multi-omic Biosequence Transformers for Modeling Peptide-Nucleotide Interactions

Paper • 2408.16245 • Published Aug 29, 2024 • 6

Robust Model-Based Optimization for Challenging Fitness Landscapes

Paper • 2305.13650 • Published May 23, 2023 • 1

DNA Sequence Classification with Compressors

Paper • 2401.14025 • Published Jan 25, 2024 • 3

Exploiting Pretrained Biochemical Language Models for Targeted Drug Design

Paper • 2209.00981 • Published Sep 2, 2022 • 1

From thermodynamics to protein design: Diffusion models for biomolecule generation towards autonomous protein engineering

Paper • 2501.02680 • Published Jan 5 • 2

Transformer as Linear Expansion of Learngene

Paper • 2312.05614 • Published Dec 9, 2023 • 1

Diffusion Sequence Models for Enhanced Protein Representation and Generation

Paper • 2506.08293 • Published Jun 9 • 1

LLaMA-Gene: A General-purpose Gene Task Large Language Model Based on Instruction Fine-tuning

Paper • 2412.00471 • Published Nov 30, 2024 • 2

Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks

Paper • 2302.07868 • Published Feb 15, 2023 • 3

Bio-xLSTM: Generative modeling, representation and in-context learning of biological and chemical sequences

Paper • 2411.04165 • Published Nov 6, 2024 • 1

Predicting Anti-microbial Resistance using Large Language Models

Paper • 2401.00642 • Published Jan 1, 2024 • 2

Life-Code: Central Dogma Modeling with Multi-Omics Sequence Unification

Paper • 2502.07299 • Published Feb 11 • 2

PoET: A generative model of protein families as sequences-of-sequences

Paper • 2306.06156 • Published Jun 9, 2023 • 1

Helix-mRNA: A Hybrid Foundation Model For Full Sequence mRNA Therapeutics

Paper • 2502.13785 • Published Feb 19 • 3

Character-level Tokenizations as Powerful Inductive Biases for RNA Foundational Models

Paper • 2411.11808 • Published Nov 5, 2024 • 1

GenoTEX: A Benchmark for Automated Gene Expression Data Analysis in Alignment with Bioinformaticians

Paper • 2406.15341 • Published Jun 21, 2024 • 2

Find Central Dogma Again

Paper • 2502.06253 • Published Feb 10 • 2